BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C11LP1|AL428361
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1722 1640 0.0
>3x_Contig1722
Length = 17718
Score = 1640 bits (826), Expect = 0.0
Identities = 848/855 (99%), Gaps = 1/855 (0%)
Strand = Plus / Minus
Query: 1 gatcaatcaaggaacgagacatcttcttaaacaagtgtgctaataataatccaactgttg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 14131 gatcaatcaaggaacgagacaccttcttaaacaagtgtgctaataataatccaactgttg 14072
Query: 61 aaaatgggaatttgaagtttgcttctcaaaaatattacctgtatagatgcaaaaactata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14071 aaaatgggaatttgaagtttgcttctcaaaaatattacctgtatagatgcaaaaactata 14012
Query: 121 gatatctaaaatgaagtcactcagaaacaatattatgaactagtaacaacgaaagaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14011 gatatctaaaatgaagtcactcagaaacaatattatgaactagtaacaacgaaagaggaa 13952
Query: 181 actgtcaattagaaaggtaacctttaccacattttccacgcatttcttaatggttaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13951 actgtcaattagaaaggtaacctttaccacattttccacgcatttcttaatggttaaaaa 13892
Query: 241 ttgtttatattcctgcgttttgtatctgcgttttctgcagtttaaaccttaagccaccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13891 ttgtttatattcctgcgttttgtatctgcgttttctgcagtttaaaccttaagccaccgc 13832
Query: 301 caacaaatgcagggtaactattttggtgaaagcaaatgcgtasatanccgtaagagcaaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 13831 caacaaatgcagggtaactattttggtgaaagcaaatgcgtagcataccgtaagagcaaa 13772
Query: 361 gcgtgcaggtgatcgatgacaagaccatgcagaatgttcattgtataagtcggttgttgc 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13771 gcgt-caggtgatcgatgacaagaccatgcagaatgttcattgtataagtcggttgttgc 13713
Query: 421 taatgctacacgttgaagtttatatgtatatatgtgtcttgaattttataataaagtatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13712 taatgctacacgttgaagtttatatgtatatatgtgtcttgaattttataataaagtatg 13653
Query: 481 ttttagtaataaagtcgtttctcgaaaactgtttgaataaaatgtgaagtagagtcaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13652 ttttagtaataaagtcgtttctcgaaaactgtttgaataaaatgtgaagtagagtcaata 13593
Query: 541 acgtaaaaaaatgtacctgagatgcctgaaccattgaattatctattcgttgcaaattcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13592 acgtaaaaaaatgtacctgagatgcctgaaccattgaattatctattcgttgcaaattcg 13533
Query: 601 ttggtgttatactgtcatctgttgctatttatttgatactgaatatcgatttaccaccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13532 ttggtgttatactgtcatctgttgctatttatttgatactgaatatcgatttaccaccgc 13473
Query: 661 attcattgtggtgatggacaatttgtttctttctcttccgtgctgcaagagtggcagaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13472 attcattgtggtgatggacaatttgtttctttctcttccgtgctgcaagagtggcagaat 13413
Query: 721 tcgctaacgcagaaccgctgttcctggacgccacggacgagctcctggaaatagaagcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13412 tcgctaacgcagaaccgctgttcctggacgccacggacgagctcctggaaatagaagcgg 13353
Query: 781 aagaattcgatttcaaaattgagtttgagccattggtattcgtagagtcatcagggacca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13352 aagaattcgatttcaaaattgagtttgagccattggtattcgtagagtcatcagggacca 13293
Query: 841 ttgaattaagcgaca 855
|||||||||||||||
Sbjct: 13292 ttgaattaagcgaca 13278
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7088
Number of Sequences: 1807
Number of extensions: 7088
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)